Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0620 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207570 bp
Thymine Count
1205329 bp
Guanine Count
1239848 bp
Cytosine Count
1230882 bp
Genome Length
4889243 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | C9340_02115 | Not Available | Negative | 464321 - 465205 | 31541.6 |
| cidb/lrgb family autolysis modulator | C9340_02120 | Not Available | Negative | 465335 - 466030 | 24471.1 |
| hypothetical protein | C9340_02125 | Not Available | Negative | 466027 - 466425 | 14579.6 |
| trna dihydrouridine(16) synthase dusc | C9340_02130 | Not Available | Positive | 466664 - 467614 | 35267.6 |
| protein yohp | C9340_02135 | Not Available | Negative | 468002 - 468085 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | C9340_02140 | Not Available | Positive | 468219 - 469745 | 55638.3 |
| sdr family oxidoreductase | C9340_02145 | Not Available | Positive | 469798 - 470559 | 26983.4 |
| deda family protein | C9340_02150 | Not Available | Negative | 470689 - 471267 | 21445.9 |
| yip1 family protein | C9340_02155 | Not Available | Positive | 471437 - 472024 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | C9340_02160 | Not Available | Positive | 472198 - 473130 | 33889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





