Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0620 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207570 bp
Thymine Count
1205329 bp
Guanine Count
1239848 bp
Cytosine Count
1230882 bp
Genome Length
4889243 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lateral flagellar export/assembly protein lafu | C9340_23875 | Not Available | Negative | 4870890 - 4871660 | 28386.2 |
| flagellar type iii secretion system protein flha | C9340_23880 | Not Available | Positive | 4871620 - 4873359 | 63166.1 |
| type ii toxin-antitoxin system hica family toxin | C9340_23885 | Not Available | Positive | 4873464 - 4873742 | 10187.3 |
| type ii toxin-antitoxin system hicb family antitoxin | C9340_23890 | Not Available | Positive | 4873735 - 4874091 | 13409.8 |
| peptidoglycan endopeptidase | C9340_23895 | Not Available | Negative | 4874148 - 4874921 | 29717.5 |
| type ii toxin-antitoxin system antitoxin dinj | C9340_23900 | Not Available | Positive | 4875107 - 4875367 | 9392.3 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | C9340_23905 | Not Available | Positive | 4875370 - 4875648 | 10801.2 |
| transpeptidase | C9340_23910 | Not Available | Positive | 4875804 - 4876544 | 28022.8 |
| class ii glutamine amidotransferase | C9340_23915 | Not Available | Negative | 4876515 - 4877282 | 28637.2 |
| phosphoheptose isomerase | C9340_23920 | Not Available | Negative | 4877488 - 4878066 | 20816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





