Escherichia coli strain FWSEC0620

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0620 is a Gram-negative, rod-shaped bacterium known for its facultative anaerobic metabolism and mobility, facilitated by the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and it typically exists in pairs or as singles. FWSEC0620 is predominantly host-associated and demonstrates a free-living biotic relationship. It has a diverse range of hosts, including various mammals such as Homo sapiens (humans), Bos taurus (cattle), and Canis lupus familiaris (domestic dogs), as well as other taxa including birds (Aves) and plants (e.g., Solanum lycopersicum - tomatoes). This broad host range underscores its ecological adaptability. The pathogenic potential of FWSEC0620 is significant, as it is associated with numerous health effects in humans and animals. Documented health issues include urinary tract infections (UTIs), gastrointestinal infections, peritonitis, and various forms of septicemia. The strain has also been linked to severe conditions such as hemolytic uremic syndrome (HUS) and neonatal meningitis, indicating its role in both foodborne and opportunistic infections. Given its diverse host interactions and a broad spectrum of pathogenic effects, FWSEC0620 exemplifies the importance of E. coli as both a commensal and a pathogenic organism in microbial ecology. Its ability to cause severe health complications highlights the need for continued surveillance and research into the epidemiology of this strain, particularly in relation to its transmission and environmental persistence.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0620

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0620
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0620 plasmid unnamed1

Gene Summary

Adenine Count

1207570 bp

Thymine Count

1205329 bp

Guanine Count

1239848 bp

Cytosine Count

1230882 bp

Genome Length

4889243 bp

Protein-coding Genes

4437 genes

Non-Coding Genes

203 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arac family transcriptional regulatorC9340_00995Not AvailableNegative210679 - 21153632416.5
dna-binding response regulatorC9340_01000Not AvailableNegative211549 - 21228328722.6
sensor histidine kinaseC9340_01005Not AvailableNegative212298 - 21399562661.3
alanine transaminaseC9340_01010Not AvailablePositive214372 - 21561046217.8
membrane protein ypdkC9340_01015Not AvailableNegative215675 - 2157462704.57
lipid a biosynthesis palmitoleoyltransferaseC9340_01020Not AvailableNegative216102 - 21702235495.5
duf2545 family proteinC9340_01025Not AvailablePositive217375 - 2176178923.5
lipoproteinC9340_01030Not AvailableNegative217694 - 21796910210.5
hypothetical proteinC9340_01035Not AvailablePositive218265 - 21889722907.4
formyl-coa--oxalate coa-transferaseC9340_01040Not AvailablePositive219410 - 22066045830.7

Displaying genes 361 – 370 of 4644 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total