Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0620 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1207570 bp
Thymine Count
1205329 bp
Guanine Count
1239848 bp
Cytosine Count
1230882 bp
Genome Length
4889243 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | C9340_17300 | Not Available | Positive | 3590223 - 3590723 | 18656.3 |
| type vi secretion system contractile sheath large subunit | C9340_17305 | Not Available | Positive | 3590782 - 3592320 | 58004.7 |
| type vi secretion system baseplate subunit tssk | C9340_17310 | Not Available | Positive | 3592338 - 3593675 | 49705.8 |
| dotu family type iv/vi secretion system protein | C9340_17315 | Not Available | Positive | 3593672 - 3594337 | 25330.8 |
| ompa family protein | C9340_17320 | Not Available | Positive | 3594350 - 3596002 | 60549.5 |
| hcp family type vi secretion system effector | C9340_17325 | Not Available | Positive | 3596060 - 3596551 | 18647.9 |
| type vi secretion system atpase tssh | C9340_17330 | Not Available | Positive | 3596742 - 3599387 | 97974.4 |
| type vi secretion system tip protein vgrg | C9340_17335 | Not Available | Positive | 3599399 - 3599876 | 18227.9 |
| tryptophan permease | C9340_17340 | Not Available | Negative | 3600021 - 3601265 | 44379.2 |
| dead/deah box family atp-dependent rna helicase | C9340_17345 | Not Available | Negative | 3601419 - 3603308 | 70550.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





