Escherichia coli strain FWSEC0611

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0611 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. This strain is mesophilic, with an optimal growth temperature of 37°C. FWSEC0611 is primarily host-associated, demonstrating a wide range of biotic relationships with various hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and other vertebrates, as well as some invertebrates like Apis mellifera (honeybees) and various plants such as Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). This diversity in hosts suggests a versatile ecological role, enabling the strain to adapt to different environments. The health effects attributed to FWSEC0611 are significant, with associations to numerous conditions such as urinary tract infections (UTIs), gastrointestinal infections, and severe outcomes like hemolytic uremic syndrome (HUS). This strain's pathogenic potential in humans highlights its role as a notable pathogen in clinical settings, contributing to a variety of diseases ranging from mild diarrhea to severe systemic infections. The presence of E. coli FWSEC0611 in both animal and human hosts indicates its potential impact on public health and food safety, emphasizing the importance of monitoring this strain in clinical and environmental contexts to mitigate health risks associated with its pathogenicity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0611

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0611
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0611 plasmid unnamed2

Gene Summary

Adenine Count

1234688 bp

Thymine Count

1237176 bp

Guanine Count

1271431 bp

Cytosine Count

1270378 bp

Genome Length

5019577 bp

Protein-coding Genes

4486 genes

Non-Coding Genes

394 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspfC9334_17325Not AvailableNegative3564415 - 356563844906.7
type ii secretion system protein gspeC9334_17330Not AvailableNegative3565638 - 356713155209.8
type ii secretion system protein gspdC9334_17335Not AvailableNegative3567131 - 356919174237.1
type ii secretion system protein gspcC9334_17340Not AvailableNegative3569221 - 357018035752.2
hypothetical proteinC9334_17345Not AvailableNegative3570198 - 357060814700.8
prepilin peptidaseC9334_17350Not AvailableNegative3570674 - 357148329510.0
accessory colonization factor acfdC9334_17355Not AvailableNegative3571810 - 3576375167850.0
glycolate permease glcaC9334_17360Not AvailableNegative3576861 - 357854358909.6
malate synthase gC9334_17365Not AvailableNegative3578899 - 358107080578.3
protein glcgC9334_17370Not AvailableNegative3581092 - 358149613737.5

Displaying genes 3611 – 3620 of 4882 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total