Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0611 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1234688 bp
Thymine Count
1237176 bp
Guanine Count
1271431 bp
Cytosine Count
1270378 bp
Genome Length
5019577 bp
Protein-coding Genes
4486 genes
Non-Coding Genes
394 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | C9334_16480 | Not Available | Positive | 3396792 - 3396869 | 2554.02 |
| fadr family transcriptional regulator | C9334_16485 | Not Available | Positive | 3397281 - 3397973 | 26063.5 |
| dha2 family efflux mfs transporter permease subunit | C9334_16490 | Not Available | Positive | 3397996 - 3399423 | 51445.9 |
| transcriptional regulator rbsr | C9334_16495 | Not Available | Negative | 3399389 - 3400381 | 36587.1 |
| ribokinase | C9334_16500 | Not Available | Negative | 3400385 - 3401314 | 32292.4 |
| ribose abc transporter substrate-binding protein rbsb | C9334_16505 | Not Available | Negative | 3401440 - 3402330 | 30940.2 |
| ribose abc transporter permease | C9334_16510 | Not Available | Negative | 3402355 - 3403320 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | C9334_16515 | Not Available | Negative | 3403325 - 3404830 | 54988.0 |
| d-ribose pyranase | C9334_16520 | Not Available | Negative | 3404838 - 3405257 | 15316.5 |
| low affinity potassium transport system protein kup | C9334_16525 | Not Available | Negative | 3405424 - 3407292 | 69298.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





