Escherichia coli strain FWSEC0554

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0554 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This strain is motile, facilitated by the presence of flagella, and typically exists in pairs or singles. It is mesophilic, with an optimal growth temperature of 37°C. FWSEC0554 is associated with a wide range of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and many others across diverse taxa such as mammals, birds, and even plants like Solanum lycopersicum (tomatoes). This broad host range underlines its ecological versatility and ability to adapt to different environments. The strain is known for its potential to cause various health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, peritonitis, and neonatal meningitis. It has been implicated in severe conditions such as hemolytic uremic syndrome (HUS) and septicemia, as well as foodborne illnesses. These pathogenic traits highlight its significance in clinical microbiology and public health. In summary, E. coli strain FWSEC0554 exemplifies the complex interactions between microorganisms and their hosts, illustrating how a single strain can inhabit diverse ecological niches while also posing significant health risks. Its ability to infect multiple species and cause various diseases emphasizes the importance of monitoring and understanding such pathogens in both medical and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0554

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0554
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0554 plasmid unnamed4

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

188 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk system potassium uptake protein trkhC9314_16225Not AvailableNegative3316567 - 331801852962.9
impact family proteinC9314_16230Not AvailableNegative3318057 - 331867121830.2
xaa-pro dipeptidaseC9314_16235Not AvailableNegative3318671 - 332000250178.9
fatty acid oxidation complex subunit alpha fadbC9314_16240Not AvailablePositive3320192 - 332238179597.5
acetyl-coa c-acyltransferase fadaC9314_16245Not AvailablePositive3322391 - 332355440848.6
nad(p)h-flavin reductaseC9314_16250Not AvailableNegative3323746 - 332444726243.5
3-octaprenyl-4-hydroxybenzoate decarboxylaseC9314_16255Not AvailableNegative3324493 - 332598655606.8
transcription/translation regulatory transformer protein rfahC9314_16260Not AvailablePositive3326153 - 332664118341.3
tat-linked quality control protein tatdC9314_16265Not AvailableNegative3326638 - 332742029061.7
sec-independent protein translocase subunit tatcC9314_16270Not AvailableNegative3327462 - 332823828877.9

Displaying genes 3351 – 3360 of 5290 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total