Escherichia coli strain FWSEC0550

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0550 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism and is capable of mobility due to the presence of flagella. This strain is typically found in host-associated habitats and has a mesophilic temperature range, with an optimal growth temperature of 37°C. E. coli FWSEC0550 has a single replicon and is characterized by its double-membrane structure. This strain is known to have a diverse range of hosts, including Homo sapiens, various livestock species such as Bos taurus and Gallus gallus, as well as other vertebrates and even certain plants like Solanum lycopersicum and Brassica oleracea var. italica. Its biotic relationships indicate that it can exist as a free-living organism, highlighting its adaptability across different environments. E. coli FWSEC0550 is associated with numerous health effects, predominantly affecting humans and animals. It is implicated in conditions such as urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis. Additionally, it can lead to severe outcomes like hemolytic uremic syndrome (HUS), septicemia, and even colorectal cancer. The strain's ability to cause a wide array of diseases underscores its pathogenic potential. From a biological and ecological perspective, the versatility of E. coli FWSEC0550 in terms of host range and pathogenicity illustrates the complex interactions between microorganisms and their hosts, which can significantly impact health outcomes in both humans and animals. This adaptability emphasizes the importance of monitoring such strains in clinical and agricultural settings to mitigate their potential health risks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0550

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0550
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0550 plasmid unnamed2

Gene Summary

Adenine Count

1220534 bp

Thymine Count

1217043 bp

Guanine Count

1246436 bp

Cytosine Count

1242669 bp

Genome Length

4938517 bp

Protein-coding Genes

4383 genes

Non-Coding Genes

320 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase small subunitC9312_00025Not AvailableNegative3937 - 42009924.83
Hypothetical proteinC9312_00030Not AvailableNegative4202 - 462115931.0
Trna-asp;Not AvailableNot AvailablePositive4467 - 4543Not Available
Plasmid partitioning/stability family proteinC9312_00035Not AvailableNegative4641 - 495511579.5
RecombinaseC9312_00040Not AvailableNegative4960 - 591934837.6
Trna-asn;Not AvailableNot AvailablePositive4984 - 5059Not Available
Replication proteinC9312_00045Not AvailableNegative5996 - 8818107231.0
Trna-asn;Not AvailableNot AvailablePositive6808 - 6883Not Available
Hypothetical proteinC9312_00050Not AvailableNegative8825 - 919013807.7
Trna-asn;Not AvailableNot AvailablePositive9217 - 9292Not Available

Displaying genes 31 – 40 of 4736 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total