Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee chaperone cesl | C9312_20335 | Not Available | Positive | 4168700 - 4169053 | 13910.8 |
| type iii secretion system lee export apparatus protein escv | C9312_20340 | Not Available | Positive | 4169050 - 4171077 | 75142.6 |
| type iii secretion system lee atpase escn | C9312_20345 | Not Available | Positive | 4171061 - 4172401 | 48868.2 |
| type iii secretion protein | C9312_20350 | Not Available | Positive | 4172461 - 4172781 | 12362.7 |
| duf1106 domain-containing protein | C9312_20355 | Not Available | Positive | 4172774 - 4173190 | 16348.6 |
| type iii secretion system protein sepq | C9312_20360 | Not Available | Positive | 4173153 - 4174070 | 34937.9 |
| secretion protein esph | C9312_20365 | Not Available | Positive | 4174101 - 4174616 | 19508.2 |
| tir chaperone family protein | C9312_20370 | Not Available | Negative | 4174835 - 4175194 | 13791.4 |
| t3ss effector protein map | C9312_20375 | Not Available | Positive | 4175475 - 4176086 | 22559.1 |
| type iii secretion system lee translocated intimin receptor tir | C9312_20380 | Not Available | Positive | 4176535 - 4178151 | 55569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





