Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee export apparatus switch protein escu | C9312_20285 | Not Available | Positive | 4161798 - 4162835 | 39310.5 |
| type iii secretion system lee muramidase etga | C9312_20290 | Not Available | Negative | 4162832 - 4163290 | 17055.5 |
| negative regulator grlr | C9312_20295 | Not Available | Positive | 4163487 - 4163843 | 13296.0 |
| type iii secretion system lee transcriptional regulator grla | C9312_20300 | Not Available | Positive | 4163918 - 4164331 | 16153.5 |
| type iii secretion system lee chaperone cesd | C9312_20305 | Not Available | Negative | 4164717 - 4165172 | 17486.7 |
| type iii secretion system lee outer membrane ring protein escc | C9312_20310 | Not Available | Negative | 4165186 - 4166724 | 56576.5 |
| sepd | C9312_20315 | Not Available | Negative | 4166724 - 4167179 | 17536.9 |
| type iii secretion system lee inner membrane ring protein escj | C9312_20320 | Not Available | Negative | 4167185 - 4167757 | 20906.2 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9312_20325 | Not Available | Negative | 4167759 - 4168136 | 13383.9 |
| type iii secretion system protein sepz | C9312_20330 | Not Available | Negative | 4168220 - 4168516 | 9571.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





