Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna endonuclease smra | C9312_15115 | Not Available | Positive | 3136804 - 3137367 | 21563.8 |
| sensor domain-containing diguanylate cyclase | C9312_15120 | Not Available | Negative | 3137388 - 3138620 | 46483.9 |
| zinc transporter zntb | C9312_15125 | Not Available | Positive | 3138875 - 3139858 | 36614.3 |
| atp-dependent rna helicase dbpa | C9312_15130 | Not Available | Positive | 3140336 - 3141709 | 49284.9 |
| trna 2-thiocytidine(32) synthetase ttca | C9312_15135 | Not Available | Negative | 3141838 - 3142773 | 35461.8 |
| universal stress protein uspf | C9312_15140 | Not Available | Negative | 3142949 - 3143383 | 16007.5 |
| porin ompn | C9312_15145 | Not Available | Negative | 3143524 - 3144657 | 41236.0 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C9312_15150 | Not Available | Negative | 3145025 - 3148549 | 128875.0 |
| duf333 domain-containing protein | C9312_15155 | Not Available | Positive | 3148823 - 3149089 | 8722.53 |
| heat-shock protein hslj | C9312_15160 | Not Available | Negative | 3149086 - 3149508 | 15166.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





