Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a 1-diphosphate synthase | C9312_14940 | Not Available | Positive | 3102365 - 3103078 | 26760.7 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | C9312_14945 | Not Available | Positive | 3103489 - 3104055 | 21041.1 |
| cyclic di-gmp phosphodiesterase | C9312_14950 | Not Available | Positive | 3104236 - 3105792 | 58557.5 |
| abc transporter substrate-binding protein | C9312_14955 | Not Available | Positive | 3105874 - 3107688 | 69809.8 |
| abc transporter permease | C9312_14960 | Not Available | Positive | 3107689 - 3108783 | 40362.6 |
| abc transporter permease | C9312_14965 | Not Available | Positive | 3108783 - 3109808 | 38094.6 |
| microcin c abc transporter atp-binding protein yejf | C9312_14970 | Not Available | Positive | 3109810 - 3111399 | 58793.9 |
| hypothetical protein | C9312_14975 | Not Available | Negative | 3111403 - 3111747 | 12525.9 |
| bcr/cfla family multidrug efflux mfs transporter | C9312_14980 | Not Available | Negative | 3112080 - 3113270 | 43256.3 |
| 16s rrna pseudouridine(516) synthase rsua | C9312_14985 | Not Available | Negative | 3113298 - 3113993 | 25866.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





