Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance outer membrane protein mdtq | C9312_14740 | Not Available | Negative | 3056754 - 3058280 | 55654.3 |
| protein yohp | C9312_14745 | Not Available | Positive | 3058414 - 3058497 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | C9312_14750 | Not Available | Negative | 3058885 - 3059835 | 35372.7 |
| hypothetical protein | C9312_14755 | Not Available | Positive | 3060074 - 3060472 | 14580.6 |
| cidb/lrgb family autolysis modulator | C9312_14760 | Not Available | Positive | 3060469 - 3061164 | 24471.1 |
| cytidine deaminase | C9312_14765 | Not Available | Positive | 3061294 - 3062178 | 31541.6 |
| protein sana | C9312_14770 | Not Available | Positive | 3062328 - 3063047 | 27288.5 |
| duf2542 family protein | C9312_14775 | Not Available | Positive | 3063050 - 3063289 | 9264.61 |
| nad(p)-dependent oxidoreductase | C9312_14780 | Not Available | Positive | 3063608 - 3064846 | 44382.1 |
| dihydropyrimidine dehydrogenase subunit b | C9312_14785 | Not Available | Positive | 3064840 - 3066075 | 45071.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





