Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C9312_14690 | Not Available | Negative | 3045157 - 3045888 | 25560.2 |
| abc transporter atp-binding protein | C9312_14695 | Not Available | Negative | 3045893 - 3046819 | 34479.7 |
| abc transporter permease subunit | C9312_14700 | Not Available | Negative | 3046812 - 3047969 | 41191.2 |
| abc transporter substrate-binding protein | C9312_14705 | Not Available | Negative | 3047976 - 3048893 | 32583.0 |
| beta-glucosidase bglx | C9312_14710 | Not Available | Negative | 3049104 - 3051401 | 83536.8 |
| d-lactate dehydrogenase | C9312_14715 | Not Available | Positive | 3051597 - 3053312 | 64573.9 |
| d-alanyl-d-alanine endopeptidase | C9312_14720 | Not Available | Negative | 3053351 - 3054283 | 33916.4 |
| yip1 family protein | C9312_14725 | Not Available | Negative | 3054457 - 3055062 | 22377.9 |
| deda family protein | C9312_14730 | Not Available | Positive | 3055232 - 3055810 | 21409.9 |
| sdr family oxidoreductase | C9312_14735 | Not Available | Negative | 3055940 - 3056701 | 26953.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





