Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter subunit mdta | C9312_14585 | Not Available | Positive | 3024044 - 3025291 | 44500.8 |
| multidrug efflux rnd transporter permease subunit mdtb | C9312_14590 | Not Available | Positive | 3025291 - 3028413 | 112087.0 |
| multidrug efflux rnd transporter permease subunit mdtc | C9312_14595 | Not Available | Positive | 3028414 - 3031491 | 111005.0 |
| mfs transporter | C9312_14600 | Not Available | Positive | 3031492 - 3032907 | 50902.3 |
| two-component system sensor histidine kinase baes | C9312_14605 | Not Available | Positive | 3032904 - 3034307 | 52054.4 |
| two-component system response regulator baer | C9312_14610 | Not Available | Positive | 3034304 - 3035026 | 27666.6 |
| duf1508 domain-containing protein | C9312_14615 | Not Available | Positive | 3035217 - 3035549 | 11994.9 |
| type ii toxin-antitoxin system pard family antitoxin | C9312_14620 | Not Available | Positive | 3035758 - 3036054 | 11294.6 |
| type ii toxin-antitoxin system rele/pare family toxin | C9312_14625 | Not Available | Positive | 3036056 - 3036352 | 11540.8 |
| u32 family peptidase | C9312_14630 | Not Available | Positive | 3036455 - 3037816 | 51212.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





