Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C9312_14040 | Not Available | Negative | 2913242 - 2914420 | 41332.2 |
| hypothetical protein | C9312_14045 | Not Available | Negative | 2914488 - 2915348 | 31939.0 |
| duf3343 domain-containing protein | C9312_14050 | Not Available | Negative | 2915413 - 2915664 | 9395.49 |
| hypothetical protein | C9312_14055 | Not Available | Negative | 2915661 - 2916428 | 27246.7 |
| 2-hydroxyacyl-coa dehydratase subunit d | C9312_14060 | Not Available | Negative | 2916438 - 2917589 | 42758.3 |
| duf445 domain-containing protein | C9312_14065 | Not Available | Negative | 2917705 - 2918985 | 48221.6 |
| multidrug efflux mfs transporter mdtm | C9312_14070 | Not Available | Negative | 2919026 - 2920258 | 44570.1 |
| rpn family recombination-promoting nuclease/putative transposase | C9312_14075 | Not Available | Positive | 2920736 - 2921692 | 37180.9 |
| plp-dependent aminotransferase family protein | C9312_14080 | Not Available | Negative | 2921935 - 2923347 | 53139.8 |
| duf1127 domain-containing protein | C9312_14085 | Not Available | Positive | 2923524 - 2923688 | 6808.31 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





