Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein soxs | C9312_13820 | Not Available | Positive | 2870447 - 2870770 | 12911.6 |
| eal domain-containing protein | C9312_13825 | Not Available | Negative | 2870773 - 2872359 | 60748.7 |
| hypothetical protein | C9312_13830 | Not Available | Positive | 2872789 - 2873070 | 10304.0 |
| ssdna-binding protein | C9312_13835 | Not Available | Negative | 2873169 - 2873705 | 18976.1 |
| excinuclease abc subunit uvra | C9312_13840 | Not Available | Positive | 2873959 - 2876781 | 103874.0 |
| mmcq/yjbr family dna-binding protein | C9312_13845 | Not Available | Negative | 2876816 - 2877172 | 13520.2 |
| thiamine phosphate synthase | C9312_13850 | Not Available | Negative | 2877176 - 2877592 | 15670.8 |
| acid phosphatase apha | C9312_13855 | Not Available | Negative | 2877703 - 2878416 | 26074.9 |
| aromatic amino acid transaminase | C9312_13865 | Not Available | Negative | 2879524 - 2880717 | 43506.1 |
| alanine racemase biosynthetic | C9312_13870 | Not Available | Negative | 2880970 - 2882049 | 39143.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





