Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein nrfc | C9312_13770 | Not Available | Negative | 2857352 - 2858023 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | C9312_13775 | Not Available | Negative | 2858020 - 2858586 | 20657.6 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | C9312_13780 | Not Available | Negative | 2858631 - 2860067 | 53704.7 |
| acetate--coa ligase | C9312_13785 | Not Available | Positive | 2860460 - 2862418 | 72170.5 |
| duf485 domain-containing protein | C9312_13790 | Not Available | Positive | 2862618 - 2862932 | 11672.3 |
| cation acetate symporter | C9312_13795 | Not Available | Positive | 2862929 - 2864578 | 59200.7 |
| pentapeptide repeat-containing protein | C9312_13800 | Not Available | Positive | 2864756 - 2866048 | 49260.9 |
| na+/h+ antiporter | C9312_13805 | Not Available | Negative | 2866202 - 2867851 | 60527.5 |
| ncs2 family permease | C9312_13810 | Not Available | Negative | 2868002 - 2869351 | 45729.4 |
| redox-sensitive transcriptional activator soxr | C9312_13815 | Not Available | Negative | 2869897 - 2870361 | 17180.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





