Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux transporter periplasmic adaptor subunit mdtn | C9312_13720 | Not Available | Positive | 2844286 - 2845317 | 36896.3 |
| multidrug efflux transporter permease subunit mdto | C9312_13725 | Not Available | Positive | 2845317 - 2847368 | 76240.2 |
| multidrug efflux transporter outer membrane subunit mdtp | C9312_13730 | Not Available | Positive | 2847365 - 2848831 | 53437.3 |
| formate dehydrogenase subunit alpha | C9312_13735 | Not Available | Positive | 2849029 - 2851176 | 79228.1 |
| sel1 repeat family protein | C9312_13740 | Not Available | Positive | 2851270 - 2851959 | 25096.5 |
| glutamate/aspartate:proton symporter gltp | C9312_13745 | Not Available | Negative | 2852037 - 2853350 | 47107.0 |
| heme lyase nrfefg subunit nrfg | C9312_13750 | Not Available | Negative | 2853692 - 2854288 | 22782.5 |
| heme lyase nrfefg subunit nrff | C9312_13755 | Not Available | Negative | 2854285 - 2854668 | 14543.0 |
| heme lyase ccmf/nrfe family subunit | C9312_13760 | Not Available | Negative | 2854661 - 2856379 | 63713.3 |
| cytochrome c nitrite reductase subunit nrfd | C9312_13765 | Not Available | Negative | 2856399 - 2857355 | 35043.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





