Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiha family ribosome biogenesis gtp-binding protein | C9312_13140 | Not Available | Negative | 2725697 - 2726329 | 23562.2 |
| gtpase-activating protein | C9312_13145 | Not Available | Positive | 2726911 - 2727420 | 19060.3 |
| oxygen-independent coproporphyrinogen iii oxidase | C9312_13150 | Not Available | Positive | 2727609 - 2728982 | 52717.0 |
| hypothetical protein | C9312_13155 | Not Available | Negative | 2729172 - 2729282 | 3618.45 |
| nitrogen regulation protein nr(i) | C9312_13160 | Not Available | Negative | 2729394 - 2730803 | 52257.9 |
| nitrogen regulation protein nr(ii) | C9312_13165 | Not Available | Negative | 2730815 - 2731864 | 38558.5 |
| glutamate--ammonia ligase | C9312_13170 | Not Available | Negative | 2732038 - 2733447 | 51906.6 |
| translational gtpase typa | C9312_13175 | Not Available | Positive | 2733820 - 2735643 | 67359.5 |
| utra domain-containing protein | C9312_13180 | Not Available | Positive | 2735860 - 2736570 | 26870.2 |
| hypothetical protein | C9312_13185 | Not Available | Positive | 2736578 - 2737558 | 36974.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





