Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | C9312_12400 | Not Available | Positive | 2570361 - 2571272 | 34718.2 |
| glycine--trna ligase subunit beta | C9312_12405 | Not Available | Positive | 2571282 - 2573351 | 76859.3 |
| type i toxin-antitoxin system toxin hoka | C9312_12410 | Not Available | Positive | 2573676 - 2573828 | 5912.47 |
| cold-shock protein | C9312_12415 | Not Available | Negative | 2574016 - 2574228 | 7403.66 |
| hth-type transcriptional regulator | C9312_12420 | Not Available | Negative | 2574509 - 2574799 | 11033.5 |
| duf3053 domain-containing protein | C9312_12425 | Not Available | Positive | 2575233 - 2575943 | 25664.5 |
| d-glycerate dehydrogenase | C9312_12430 | Not Available | Negative | 2575993 - 2576967 | 35412.6 |
| lipoprotein | C9312_12435 | Not Available | Negative | 2577071 - 2577730 | 22198.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | C9312_12440 | Not Available | Positive | 2577883 - 2580216 | 85841.3 |
| n-acetyltransferase | C9312_12445 | Not Available | Negative | 2580185 - 2580625 | 17119.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





