Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | C9312_12300 | Not Available | Negative | 2548692 - 2549678 | 36053.2 |
| 2,3-diketo-l-gulonate transporter large permease yian | C9312_12305 | Not Available | Negative | 2549691 - 2550968 | 45399.1 |
| 2,3-diketo-l-gulonate trap transporter permease | C9312_12310 | Not Available | Negative | 2550971 - 2551444 | 17516.9 |
| yhch/yjgk/yial family protein | C9312_12315 | Not Available | Negative | 2551562 - 2552029 | 17562.1 |
| 3-dehydro-l-gulonate 2-dehydrogenase | C9312_12320 | Not Available | Negative | 2552041 - 2553039 | 36588.9 |
| iclr family transcriptional regulator yiaj | C9312_12325 | Not Available | Positive | 2553240 - 2554088 | 31095.5 |
| 4fe-4s dicluster domain-containing protein | C9312_12330 | Not Available | Positive | 2554190 - 2554663 | 17435.1 |
| valine--pyruvate transaminase | C9312_12335 | Not Available | Negative | 2554814 - 2556067 | 46689.9 |
| alpha-amylase | C9312_12340 | Not Available | Negative | 2556245 - 2558275 | 75741.5 |
| protein bax | C9312_12345 | Not Available | Positive | 2558595 - 2559419 | 30869.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





