Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine dehydrogenase | C9312_12240 | Not Available | Positive | 2537945 - 2539096 | 40342.6 |
| aldehyde dehydrogenase | C9312_12245 | Not Available | Positive | 2539261 - 2540799 | 56367.6 |
| duf3302 domain-containing protein | C9312_12255 | Not Available | Positive | 2541344 - 2541667 | 12434.3 |
| hlyd family secretion protein | C9312_12260 | Not Available | Positive | 2541673 - 2542809 | 41773.5 |
| lysr family transcriptional regulator | C9312_12265 | Not Available | Negative | 2542806 - 2543780 | 37280.5 |
| mipa/ompv family protein | C9312_12270 | Not Available | Positive | 2543904 - 2544644 | 27384.9 |
| l-ribulose-5-phosphate 4-epimerase | C9312_12280 | Not Available | Negative | 2544991 - 2545686 | 25534.2 |
| l-ribulose-5-phosphate 3-epimerase | C9312_12285 | Not Available | Negative | 2545680 - 2546540 | 32484.9 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | C9312_12290 | Not Available | Negative | 2546533 - 2547195 | 23534.2 |
| carbohydrate kinase | C9312_12295 | Not Available | Negative | 2547192 - 2548688 | 55275.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





