Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | C9312_12140 | Not Available | Positive | 2510589 - 2515550 | 181577.0 |
| penicillin-binding protein 1c | C9312_12145 | Not Available | Positive | 2515551 - 2517863 | 84923.6 |
| nucleoside-diphosphate kinase | C9312_12150 | Not Available | Positive | 2518012 - 2518443 | 15464.3 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | C9312_12155 | Not Available | Positive | 2518593 - 2519747 | 43088.0 |
| cytoskeleton protein rodz | C9312_12160 | Not Available | Positive | 2520032 - 2521045 | 36174.5 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | C9312_12165 | Not Available | Positive | 2521072 - 2522190 | 40714.1 |
| histidine--trna ligase | C9312_12170 | Not Available | Positive | 2522301 - 2523575 | 47063.2 |
| tetratricopeptide repeat protein | C9312_12175 | Not Available | Positive | 2523593 - 2524213 | 22221.3 |
| outer membrane protein assembly factor bamb | C9312_12180 | Not Available | Positive | 2524224 - 2525402 | 41829.5 |
| ribosome biogenesis gtpase der | C9312_12185 | Not Available | Positive | 2525520 - 2526992 | 55039.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





