Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | C9312_11830 | Not Available | Negative | 2445875 - 2446564 | 25641.6 |
| autonomous glycyl radical cofactor grca | C9312_11835 | Not Available | Positive | 2446869 - 2447252 | 14285.0 |
| cysteine/o-acetylserine efflux protein | C9312_11840 | Not Available | Negative | 2447308 - 2447895 | 21249.5 |
| lysr family transcriptional regulator | C9312_11845 | Not Available | Positive | 2447998 - 2448879 | 33273.3 |
| atp-dependent rna helicase srmb | C9312_11850 | Not Available | Negative | 2449088 - 2450422 | 49901.0 |
| trna (adenosine(37)-n6)-methyltransferase trmm | C9312_11855 | Not Available | Positive | 2450554 - 2451291 | 27209.4 |
| l-aspartate oxidase | C9312_11860 | Not Available | Negative | 2451276 - 2452898 | 60267.8 |
| rpoe leader peptide rsed | C9312_11865 | Not Available | Positive | 2453174 - 2453329 | 6229.83 |
| ecf rna polymerase sigma-e factor | C9312_11870 | Not Available | Positive | 2453326 - 2453901 | 21727.0 |
| anti-sigma-e factor rsea | C9312_11875 | Not Available | Positive | 2453934 - 2454584 | 24304.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





