Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin cpta | C9312_11610 | Not Available | Positive | 2393589 - 2393996 | 16065.0 |
| flavodoxin-2 | C9312_11615 | Not Available | Negative | 2394036 - 2394557 | 19701.2 |
| tyrosine recombinase xerd | C9312_11620 | Not Available | Positive | 2394669 - 2395565 | 34248.4 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | C9312_11625 | Not Available | Positive | 2395589 - 2396299 | 25661.2 |
| single-stranded-dna-specific exonuclease recj | C9312_11630 | Not Available | Positive | 2396305 - 2398038 | 63294.5 |
| peptide chain release factor 2 | C9312_11635 | Not Available | Positive | 2398129 - 2399227 | 41239.0 |
| lysine--trna ligase | C9312_11640 | Not Available | Positive | 2399237 - 2400754 | 57620.8 |
| isopentenyl-diphosphate delta-isomerase | C9312_11645 | Not Available | Negative | 2400797 - 2401345 | 20424.2 |
| hypothetical protein | C9312_11650 | Not Available | Positive | 2401400 - 2401471 | 2617.29 |
| hypothetical protein | C9312_11655 | Not Available | Negative | 2401468 - 2401593 | 4791.29 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





