Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity tryptophan permease tnab | C9312_11245 | Not Available | Positive | 2324831 - 2326078 | 45271.3 |
| multidrug efflux mfs transporter mdtl | C9312_11250 | Not Available | Positive | 2326210 - 2327385 | 41619.4 |
| hth-type transcriptional regulator yidz | C9312_11255 | Not Available | Positive | 2327360 - 2328319 | 36916.9 |
| hypothetical protein | C9312_11260 | Not Available | Positive | 2328476 - 2329225 | 27664.2 |
| chromate reductase | C9312_11265 | Not Available | Positive | 2329247 - 2329813 | 20376.8 |
| ncs2 family permease | C9312_11270 | Not Available | Negative | 2329867 - 2331204 | 46858.7 |
| 6-phosphogluconate phosphatase | C9312_11275 | Not Available | Positive | 2331369 - 2332034 | 24695.7 |
| radical sam family heme chaperone hemw | C9312_11285 | Not Available | Negative | 2332591 - 2333727 | 42545.7 |
| xtp/ditp diphosphatase | C9312_11290 | Not Available | Negative | 2333720 - 2334313 | 20964.9 |
| yggu family protein | C9312_11295 | Not Available | Negative | 2334321 - 2334611 | 10429.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





