Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1176 domain-containing protein | C9312_10495 | Not Available | Negative | 2170636 - 2171679 | 38733.5 |
| gdp-mannose pyrophosphatase nudk | C9312_10500 | Not Available | Negative | 2171805 - 2172380 | 21733.9 |
| oxidoreductase fes-binding subunit | C9312_10505 | Not Available | Negative | 2172448 - 2174427 | 71889.1 |
| nitrate/nitrite two-component system sensor histidine kinase narq | C9312_10510 | Not Available | Positive | 2174633 - 2176333 | 63616.6 |
| multidrug efflux rnd transporter permease acrd | C9312_10515 | Not Available | Positive | 2176497 - 2179610 | 113079.0 |
| hypothetical protein | C9312_10520 | Not Available | Negative | 2179709 - 2179768 | 2408.02 |
| arsc family reductase | C9312_10525 | Not Available | Positive | 2180149 - 2180505 | 13545.3 |
| succinyl-diaminopimelate desuccinylase | C9312_10530 | Not Available | Positive | 2180509 - 2181636 | 41271.4 |
| ypfn family protein | C9312_10535 | Not Available | Positive | 2181664 - 2181864 | 8071.78 |
| trna(met) cytidine acetyltransferase | C9312_10545 | Not Available | Negative | 2182745 - 2184760 | 74866.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





