Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | C9312_09660 | Not Available | Positive | 2001509 - 2001841 | 11887.9 |
| protein translocase subunit secd | C9312_09665 | Not Available | Positive | 2001869 - 2003716 | 66636.3 |
| protein translocase subunit secf | C9312_09670 | Not Available | Positive | 2003727 - 2004698 | 35384.6 |
| hnh nuclease family protein | C9312_09675 | Not Available | Positive | 2004827 - 2005174 | 13424.8 |
| nucleoside-specific channel-forming protein tsx | C9312_09680 | Not Available | Negative | 2005351 - 2006235 | 33590.6 |
| duf3251 domain-containing protein | C9312_09685 | Not Available | Negative | 2006534 - 2007073 | 19633.6 |
| transcriptional regulator nrdr | C9312_09690 | Not Available | Positive | 2007224 - 2007673 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9312_09695 | Not Available | Positive | 2007677 - 2008780 | 40439.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | C9312_09700 | Not Available | Positive | 2008869 - 2009339 | 16157.4 |
| n utilization substance protein b | C9312_09705 | Not Available | Positive | 2009359 - 2009778 | 15689.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





