Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0550 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1220534 bp
Thymine Count
1217043 bp
Guanine Count
1246436 bp
Cytosine Count
1242669 bp
Genome Length
4938517 bp
Protein-coding Genes
4383 genes
Non-Coding Genes
320 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | C9312_09125 | Not Available | Positive | 1883238 - 1885139 | 70860.6 |
| rod shape-determining protein roda | C9312_09130 | Not Available | Positive | 1885142 - 1886254 | 40551.7 |
| endolytic peptidoglycan transglycosylase rlpa | C9312_09135 | Not Available | Positive | 1886265 - 1887365 | 37858.4 |
| d-alanyl-d-alanine carboxypeptidase | C9312_09140 | Not Available | Positive | 1887504 - 1888715 | 44446.5 |
| duf493 family protein | C9312_09145 | Not Available | Positive | 1888826 - 1889089 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | C9312_09150 | Not Available | Positive | 1889190 - 1889831 | 23883.0 |
| dna-binding transcriptional regulator | C9312_09155 | Not Available | Positive | 1890090 - 1891043 | 35977.5 |
| lipoyl synthase | C9312_09160 | Not Available | Positive | 1891252 - 1892217 | 36073.8 |
| twin-arginine translocase subunit tate | C9312_09165 | Not Available | Negative | 1892318 - 1892521 | 7024.71 |
| hydrolase ybem | C9312_09170 | Not Available | Negative | 1892650 - 1893438 | 28683.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





