Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0543 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295062 bp
Thymine Count
1293163 bp
Guanine Count
1301674 bp
Cytosine Count
1313419 bp
Genome Length
5231478 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
216 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C9310_17675 | Not Available | Positive | 3506509 - 3507423 | 33708.7 |
| 2,5-didehydrogluconate reductase dkgb | C9310_17680 | Not Available | Negative | 3507420 - 3508223 | 29453.4 |
| Trna-asp | Not Available | Not Available | Positive | 3508386 - 3508462 | Not Available |
| trna/rrna methyltransferase | C9310_17700 | Not Available | Positive | 3508933 - 3509724 | 28633.1 |
| uracil-dna glycosylase | C9310_17705 | Not Available | Negative | 3509772 - 3510461 | 25663.6 |
| autonomous glycyl radical cofactor grca | C9310_17710 | Not Available | Positive | 3510766 - 3511149 | 14258.0 |
| cysteine/o-acetylserine transporter | C9310_17715 | Not Available | Negative | 3511205 - 3511792 | 21219.5 |
| lysr family transcriptional regulator | C9310_17720 | Not Available | Positive | 3511895 - 3512776 | 33301.3 |
| atp-dependent rna helicase srmb | C9310_17725 | Not Available | Negative | 3512985 - 3514319 | 49931.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | C9310_17730 | Not Available | Positive | 3514451 - 3515188 | 27199.3 |
Pathways
384 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





