Escherichia coli strain FWSEC0543

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0543 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C. It is characterized by a cell arrangement that includes both singles and pairs, and it possesses two membranes in its cellular structure. This strain has a diverse range of biotic relationships, primarily being free-living but also associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and several others across multiple taxa, such as mammals, birds, and plants like Solanum lycopersicum and Brassica oleracea var. italica. FWSEC0543 is associated with numerous health effects in humans, notably urinary tract infections (UTIs), gastrointestinal infections, and neonatal meningitis, among others. These pathogenic impacts underline its significance in clinical settings, where it can lead to serious conditions such as septicemia and hemolytic uremic syndrome (HUS). The wide host range of FWSEC0543 suggests a complex ecological role, enabling interactions with different organisms and environments. This adaptability may contribute to its persistence in various habitats and its ability to cause diseases across diverse species. Understanding such dynamics can provide insights into the public health implications of E. coli strains and their management in both clinical and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0543

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0543
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0543 plasmid unnamed8

Gene Summary

Adenine Count

1295062 bp

Thymine Count

1293163 bp

Guanine Count

1301674 bp

Cytosine Count

1313419 bp

Genome Length

5231478 bp

Protein-coding Genes

5060 genes

Non-Coding Genes

216 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate kinaseC9310_00460Not AvailablePositive87883 - 8932551390.3
lauroyl-kdo(2)-lipid iv(a) myristoyltransferaseC9310_00465Not AvailableNegative89457 - 9042837412.5
murein dd-endopeptidase mepmC9310_00470Not AvailableNegative90548 - 9187049072.7
zinc abc transporter substrate-binding protein znuaC9310_00475Not AvailableNegative91886 - 9281833851.3
zinc abc transporter atp-binding protein znucC9310_00480Not AvailablePositive92897 - 9365227853.2
zinc abc transporter permease subunit znubC9310_00485Not AvailablePositive93649 - 9443427778.5
holliday junction branch migration dna helicase ruvbC9310_00490Not AvailableNegative94678 - 9568837176.0
holliday junction branch migration protein ruvaC9310_00495Not AvailableNegative95697 - 9630822029.0
hypothetical proteinC9310_00500Not AvailableNegative96447 - 965122699.43
yebb family permuted papain-like enzymeC9310_00505Not AvailablePositive96583 - 9718522676.2

Displaying genes 271 – 280 of 5283 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total