Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine metabolism transcriptional regulator caif | C9309_03550 | Not Available | Positive | 738285 - 738680 | 15393.0 |
| carnitine operon protein caie | C9309_03555 | Not Available | Negative | 738766 - 739356 | 21173.6 |
| crotonobetainyl-coa hydratase | C9309_03560 | Not Available | Negative | 739362 - 740147 | 28175.8 |
| atp-dependent acyl-coa ligase | C9309_03565 | Not Available | Negative | 740256 - 741809 | 58560.4 |
| l-carnitine coa-transferase | C9309_03570 | Not Available | Negative | 741883 - 743100 | 45099.3 |
| crotonobetainyl-coa dehydrogenase | C9309_03575 | Not Available | Negative | 743229 - 744371 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | C9309_03580 | Not Available | Negative | 744402 - 745916 | 56590.4 |
| protein fixa | C9309_03585 | Not Available | Positive | 746390 - 747160 | 27159.3 |
| electron transfer flavoprotein subunit alpha/fixb family protein | C9309_03590 | Not Available | Positive | 747175 - 748116 | 33543.1 |
| fad-dependent oxidoreductase | C9309_03595 | Not Available | Positive | 748167 - 749453 | 45705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





