Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease syme | C9309_03275 | Not Available | Positive | 679901 - 680242 | 12342.8 |
| duf262 domain-containing protein | C9309_03280 | Not Available | Negative | 680289 - 682382 | 81236.9 |
| duf1127 domain-containing protein | C9309_03285 | Not Available | Negative | 682479 - 682643 | 6838.34 |
| plp-dependent aminotransferase family protein | C9309_03290 | Not Available | Positive | 682820 - 684232 | 53022.7 |
| rpn family recombination-promoting nuclease/putative transposase | C9309_03295 | Not Available | Negative | 684474 - 685418 | 36824.6 |
| multidrug efflux mfs transporter mdtm | C9309_03300 | Not Available | Positive | 685885 - 687117 | 44563.0 |
| duf445 domain-containing protein | C9309_03305 | Not Available | Positive | 687158 - 688438 | 48191.6 |
| 2-hydroxyacyl-coa dehydratase subunit d | C9309_03310 | Not Available | Positive | 688554 - 689705 | 42742.2 |
| hypothetical protein | C9309_03315 | Not Available | Positive | 689715 - 690482 | 27160.6 |
| duf3343 domain-containing protein | C9309_03320 | Not Available | Positive | 690479 - 690736 | 9655.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





