Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-specific channel-forming protein tsx | C9309_02160 | Not Available | Positive | 440317 - 441195 | 33419.5 |
| hnh endonuclease | C9309_02165 | Not Available | Negative | 441372 - 441719 | 13364.7 |
| protein translocase subunit secf | C9309_02170 | Not Available | Negative | 441848 - 442819 | 35384.6 |
| protein translocase subunit secd | C9309_02175 | Not Available | Negative | 442830 - 444677 | 66636.3 |
| preprotein translocase subunit yajc | C9309_02180 | Not Available | Negative | 444705 - 445037 | 11887.9 |
| trna guanosine(34) transglycosylase tgt | C9309_02185 | Not Available | Negative | 445060 - 446187 | 42543.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C9309_02190 | Not Available | Negative | 446243 - 447313 | 39433.0 |
| acp phosphodiesterase | C9309_02195 | Not Available | Positive | 447406 - 447987 | 22943.3 |
| maltodextrin glucosidase | C9309_02200 | Not Available | Negative | 447992 - 449809 | 69193.9 |
| proline-specific permease proy | C9309_02205 | Not Available | Negative | 449965 - 451338 | 50234.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





