Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein ynek | C9309_30505 | Not Available | Negative | 5683321 - 5683779 | 17582.9 |
| lysr family transcriptional regulator | C9309_30510 | Not Available | Negative | 5683857 - 5684738 | 32423.8 |
| succinate-semialdehyde dehydrogenase | C9309_30515 | Not Available | Positive | 5684839 - 5686227 | 49647.6 |
| glutaminase 2 | C9309_30520 | Not Available | Positive | 5686291 - 5687217 | 33517.6 |
| duf4186 domain-containing protein | C9309_30525 | Not Available | Positive | 5687217 - 5687576 | 13544.5 |
| diguanylate cyclase | C9309_30530 | Not Available | Positive | 5687715 - 5689133 | 52212.6 |
| tagaturonate reductase | C9309_30535 | Not Available | Positive | 5689360 - 5690811 | 54924.5 |
| hypothetical protein | C9309_30540 | Not Available | Positive | 5691018 - 5691932 | 34766.9 |
| methyltransferase domain-containing protein | C9309_30545 | Not Available | Negative | 5691936 - 5692442 | 19799.7 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | C9309_30550 | Not Available | Negative | 5692396 - 5693265 | 31398.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





