Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | C9309_30300 | Not Available | Positive | 5645546 - 5646142 | 20917.4 |
| phosphoglycerate dehydrogenase | C9309_30305 | Not Available | Positive | 5646214 - 5647161 | 34488.8 |
| Trna-met | Not Available | Not Available | Positive | 5647241 - 5647317 | Not Available |
| murein transglycosylase a | C9309_30315 | Not Available | Positive | 5647526 - 5648623 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9309_30320 | Not Available | Positive | 5648700 - 5649506 | 28563.6 |
| cysteine desulfurase sulfur acceptor subunit csde | C9309_30325 | Not Available | Negative | 5649557 - 5650000 | 15927.2 |
| cysteine desulfurase csda | C9309_30330 | Not Available | Negative | 5650000 - 5651205 | 43306.7 |
| ygdi/ygdr family lipoprotein | C9309_30335 | Not Available | Positive | 5651397 - 5651624 | 8174.67 |
| transcriptional regulator gcva | C9309_30340 | Not Available | Positive | 5651975 - 5652892 | 34431.5 |
| duf423 domain-containing protein | C9309_30345 | Not Available | Positive | 5652911 - 5653306 | 14334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





