Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon protein c | C9309_29580 | Not Available | Positive | 5521228 - 5521500 | 10101.8 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C9309_29590 | Not Available | Negative | 5521788 - 5523152 | 48965.5 |
| prepilin peptidase | C9309_29595 | Not Available | Negative | 5523157 - 5523792 | 22952.1 |
| lytic transglycosylase | C9309_29600 | Not Available | Negative | 5523811 - 5524284 | 17765.6 |
| prepilin-type cleavage/methylation domain-containing protein | C9309_29605 | Not Available | Negative | 5524338 - 5524874 | 19396.4 |
| type ii secretion protein f | C9309_29610 | Not Available | Negative | 5524948 - 5526048 | 41033.3 |
| type ii secretion protein e | C9309_29615 | Not Available | Negative | 5526050 - 5527558 | 56042.2 |
| type iv pilus biogenesis protein pilp | C9309_29620 | Not Available | Negative | 5527643 - 5528095 | 16292.5 |
| pilus assembly protein | C9309_29625 | Not Available | Negative | 5528085 - 5528419 | 12713.0 |
| dna primase | C9309_29630 | Not Available | Positive | 5528420 - 5529433 | 37766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





