Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | C9309_29355 | Not Available | Positive | 5487349 - 5488380 | 40242.5 |
| nika protein | C9309_29365 | Not Available | Positive | 5488826 - 5489158 | 12598.5 |
| relaxase nikb | C9309_29370 | Not Available | Positive | 5489170 - 5489824 | 25145.6 |
| copper resistance protein | C9309_29375 | Not Available | Positive | 5489826 - 5489948 | 4415.36 |
| hypothetical protein | C9309_29380 | Not Available | Positive | 5489903 - 5490157 | 9804.08 |
| hypothetical protein | C9309_29385 | Not Available | Positive | 5490217 - 5490447 | 8807.48 |
| tola family protein | C9309_29390 | Not Available | Negative | 5490545 - 5490976 | 16141.3 |
| relaxase nikb | C9309_29395 | Not Available | Negative | 5491044 - 5493755 | 104548.0 |
| nika protein | C9309_29400 | Not Available | Negative | 5493767 - 5494099 | 12731.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | C9309_29405 | Not Available | Positive | 5494331 - 5494666 | 12432.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





