Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4942 domain-containing protein | C9309_28895 | Not Available | Positive | 5405792 - 5406610 | 30649.6 |
| atp/gtp-binding protein | C9309_28900 | Not Available | Positive | 5406607 - 5407812 | 45286.0 |
| hypothetical protein | C9309_28905 | Not Available | Negative | 5407876 - 5408079 | 7300.92 |
| duf1173 family protein | C9309_28910 | Not Available | Negative | 5408092 - 5409411 | 49343.2 |
| dna cytosine methyltransferase | C9309_28915 | Not Available | Negative | 5409662 - 5411089 | 54325.1 |
| thermonuclease family protein | C9309_28920 | Not Available | Positive | 5411304 - 5411819 | 19164.1 |
| hypothetical protein | C9309_28925 | Not Available | Positive | 5411822 - 5412718 | 34202.9 |
| hypothetical protein | C9309_28935 | Not Available | Positive | 5413153 - 5413410 | 9900.34 |
| hypothetical protein | C9309_28940 | Not Available | Positive | 5413469 - 5413702 | 8710.91 |
| hypothetical protein | C9309_28945 | Not Available | Positive | 5413748 - 5414002 | 10120.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





