Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C9309_28485 | Not Available | Negative | 5338440 - 5338922 | 18772.5 |
| conjugal transfer protein trab | C9309_28490 | Not Available | Negative | 5338930 - 5340285 | 48515.8 |
| hypothetical protein | C9309_28495 | Not Available | Negative | 5340275 - 5340736 | 17207.4 |
| trhk | C9309_28500 | Not Available | Negative | 5340738 - 5342009 | 45264.5 |
| pilus assembly protein | C9309_28505 | Not Available | Negative | 5342009 - 5342797 | 29314.2 |
| plasmid transfer protein | C9309_28510 | Not Available | Negative | 5342809 - 5343126 | 12257.1 |
| pili assembly chaperone | C9309_28515 | Not Available | Negative | 5343177 - 5343530 | 12331.5 |
| hypothetical protein | C9309_28520 | Not Available | Negative | 5344053 - 5344301 | 9448.37 |
| repb family plasmid replication initiator protein | C9309_28525 | Not Available | Negative | 5344679 - 5345554 | 33238.4 |
| hypothetical protein | C9309_28530 | Not Available | Positive | 5346031 - 5347086 | 39482.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





