Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase 2c domain-containing protein | C9309_28235 | Not Available | Positive | 5280983 - 5282620 | 59624.0 |
| kinase | C9309_28240 | Not Available | Positive | 5282646 - 5284145 | 56869.0 |
| hypothetical protein | C9309_28245 | Not Available | Negative | 5284312 - 5285394 | 40896.8 |
| hypothetical protein | C9309_28250 | Not Available | Negative | 5285755 - 5285967 | 8173.85 |
| recombinase | C9309_28255 | Not Available | Positive | 5286138 - 5287319 | 45912.4 |
| hypothetical protein | C9309_28260 | Not Available | Negative | 5287341 - 5287685 | 12880.5 |
| hypothetical protein | C9309_28265 | Not Available | Negative | 5287621 - 5288526 | 34788.2 |
| dna replication protein | C9309_28270 | Not Available | Negative | 5288536 - 5289516 | 36982.5 |
| hypothetical protein | C9309_28275 | Not Available | Negative | 5289589 - 5290035 | 17581.1 |
| hypothetical protein | C9309_28280 | Not Available | Negative | 5290052 - 5290588 | 20015.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





