Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | C9309_27730 | Not Available | Negative | 5207112 - 5207235 | 4313.09 |
| is66 family transposase | C9309_27735 | Not Available | Positive | 5207236 - 5208337 | 40938.0 |
| gnat family n-acetyltransferase | C9309_27740 | Not Available | Positive | 5208375 - 5208469 | 3580.19 |
| aaa family atpase | C9309_27745 | Not Available | Negative | 5208645 - 5209427 | 29372.4 |
| is21-like element is1326 family transposase | C9309_27750 | Not Available | Negative | 5209417 - 5210940 | 57968.5 |
| is66 family transposase | C9309_27760 | Not Available | Positive | 5212024 - 5213191 | 43899.7 |
| lysogeny establishment protein | C9309_27765 | Not Available | Negative | 5213410 - 5213721 | 11314.8 |
| recombinase | C9309_27770 | Not Available | Negative | 5213772 - 5214803 | 38556.4 |
| peptidase | C9309_27780 | Not Available | Positive | 5215443 - 5215556 | 4311.38 |
| peptidase | C9309_27785 | Not Available | Positive | 5215575 - 5215670 | 3660.34 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





