Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | C9309_27555 | Not Available | Positive | 5185024 - 5185884 | 31641.9 |
| fertility inhibition protein | C9309_27560 | Not Available | Positive | 5185987 - 5186547 | 21266.8 |
| endonuclease | C9309_27565 | Not Available | Positive | 5187095 - 5187556 | 17868.7 |
| hemolysin expression modulator hha | C9309_27570 | Not Available | Positive | 5187602 - 5187811 | 8292.97 |
| duf2726 domain-containing protein | C9309_27575 | Not Available | Positive | 5187849 - 5188439 | 22902.3 |
| replication regulatory protein repa2 | C9309_27580 | Not Available | Positive | 5188679 - 5188939 | 10038.3 |
| replication protein repa | C9309_27585 | Not Available | Negative | 5188970 - 5189083 | 4193.11 |
| positive regulator of repfic repa1 expression | C9309_27590 | Not Available | Positive | 5189164 - 5189238 | 2699.38 |
| is3-like element is3 family transposase | C9309_27595 | Not Available | Negative | 5189369 - 5190531 | 44950.8 |
| hypothetical protein | C9309_27600 | Not Available | Positive | 5190640 - 5190840 | 7310.39 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





