Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trap | C9309_27455 | Not Available | Negative | 5168217 - 5168801 | 21854.6 |
| conjugal transfer protein trbi | C9309_27460 | Not Available | Negative | 5168791 - 5169172 | 13328.5 |
| conjugal transfer protein trbb | C9309_27465 | Not Available | Negative | 5169173 - 5169389 | 8030.79 |
| type-f conjugative transfer system pilin chaperone traq | C9309_27470 | Not Available | Negative | 5169376 - 5169660 | 10813.3 |
| conjugal transfer protein trba | C9309_27475 | Not Available | Negative | 5169787 - 5170125 | 12758.2 |
| conjugal transfer protein traf | C9309_27480 | Not Available | Negative | 5170141 - 5170884 | 27976.6 |
| conjugal transfer protein trbe | C9309_27485 | Not Available | Negative | 5170877 - 5171134 | 9722.9 |
| type-f conjugative transfer system mating-pair stabilization protein tran | C9309_27490 | Not Available | Negative | 5171161 - 5172969 | 65881.4 |
| type-f conjugative transfer system pilin assembly protein trbc | C9309_27495 | Not Available | Negative | 5172966 - 5173604 | 23587.2 |
| hypothetical protein | C9309_27500 | Not Available | Negative | 5173613 - 5173918 | 11808.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





