Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b562 family protein | C9309_27175 | Not Available | Negative | 5122870 - 5123259 | 14582.7 |
| catalase/peroxidase katp | C9309_27180 | Not Available | Negative | 5123303 - 5125513 | 81798.5 |
| hypothetical protein | C9309_27185 | Not Available | Negative | 5125566 - 5125749 | 6794.19 |
| glycosyltransferase family 1 protein | C9309_27190 | Not Available | Negative | 5125750 - 5126501 | 28248.8 |
| carbohydrate transporter | C9309_27195 | Not Available | Negative | 5126501 - 5127322 | 32191.6 |
| hypothetical protein | C9309_27200 | Not Available | Negative | 5127923 - 5128102 | 6609.19 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C9309_27210 | Not Available | Negative | 5129165 - 5130163 | 37842.3 |
| phosphoethanolamine transferase cpta | C9309_27215 | Not Available | Negative | 5130237 - 5131958 | 66240.1 |
| glycosyltransferase | C9309_27220 | Not Available | Negative | 5132052 - 5132420 | 13071.9 |
| plasmid stabilization protein | C9309_27225 | Not Available | Negative | 5132564 - 5132959 | 14781.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





