Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | C9309_26420 | Not Available | Negative | 4997078 - 4997352 | 10311.3 |
| duf4222 domain-containing protein | C9309_26425 | Not Available | Negative | 4997349 - 4997648 | 11454.8 |
| hypothetical protein | C9309_26430 | Not Available | Negative | 4997654 - 4997887 | 9149.96 |
| hypothetical protein | C9309_26435 | Not Available | Negative | 4997889 - 4998077 | 6771.78 |
| rna polymerase sigma factor feci | C9309_26440 | Not Available | Positive | 4998390 - 4998911 | 19481.5 |
| protein fecr | C9309_26445 | Not Available | Positive | 4998908 - 4999861 | 35548.1 |
| tonb-dependent receptor family protein | C9309_26450 | Not Available | Positive | 4999948 - 5002272 | 85269.2 |
| fe(3+)-dicitrate abc transporter substrate-binding protein fecb | C9309_26455 | Not Available | Positive | 5002317 - 5003219 | 33108.1 |
| iron-dicitrate abc transporter permease fecc | C9309_26460 | Not Available | Positive | 5003216 - 5004214 | 34924.9 |
| fe(3+) dicitrate abc transporter permease subunit fecd | C9309_26465 | Not Available | Positive | 5004211 - 5005167 | 34152.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





