Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_26205 | Not Available | Negative | 4977978 - 4978277 | 11481.8 |
| lysis protein | C9309_26215 | Not Available | Positive | 4978632 - 4978841 | 7267.75 |
| hypothetical protein | C9309_26220 | Not Available | Positive | 4978865 - 4979089 | 8214.22 |
| hypothetical protein | C9309_26225 | Not Available | Positive | 4979446 - 4979586 | 5128.42 |
| duf3950 domain-containing protein | C9309_26230 | Not Available | Negative | 4979716 - 4979825 | 3994.83 |
| hypothetical protein | C9309_26240 | Not Available | Negative | 4979903 - 4980304 | 16021.3 |
| nine family protein | C9309_26245 | Not Available | Negative | 4980307 - 4980483 | 7268.9 |
| recombination protein ninb | C9309_26250 | Not Available | Negative | 4980480 - 4980890 | 15648.9 |
| relaxase nikb | C9309_26255 | Not Available | Positive | 4981005 - 4981681 | 26124.4 |
| conjugal transfer protein trbc | C9309_26260 | Not Available | Negative | 4981902 - 4982155 | 9508.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





