Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9309_26080 | Not Available | Negative | 4965130 - 4965312 | 6631.51 |
| lysozyme | C9309_26085 | Not Available | Negative | 4965529 - 4965841 | 11758.2 |
| trmb family transcriptional regulator | C9309_26090 | Not Available | Negative | 4965940 - 4966137 | 7372.91 |
| duf1133 family protein | C9309_26095 | Not Available | Negative | 4966379 - 4966909 | 20397.0 |
| rusa family crossover junction endodeoxyribonuclease | C9309_26100 | Not Available | Negative | 4966918 - 4967185 | 10015.3 |
| Trna-met | Not Available | Not Available | Positive | 4967186 - 4967261 | Not Available |
| antitermination protein | C9309_26110 | Not Available | Negative | 4967405 - 4968226 | 30678.9 |
| rusa family crossover junction endodeoxyribonuclease | C9309_26115 | Not Available | Negative | 4968223 - 4968505 | 10541.1 |
| exonuclease | C9309_26120 | Not Available | Negative | 4968506 - 4969340 | 31435.9 |
| duf1482 family protein | C9309_26125 | Not Available | Negative | 4969436 - 4969624 | 6724.23 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





