Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0542 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1428529 bp
Thymine Count
1431449 bp
Guanine Count
1427846 bp
Cytosine Count
1432144 bp
Genome Length
5743659 bp
Protein-coding Genes
5479 genes
Non-Coding Genes
336 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | C9309_25905 | Not Available | Positive | 4944364 - 4945620 | 46634.9 |
| phage tail protein | C9309_25910 | Not Available | Negative | 4945621 - 4945813 | 6691.63 |
| dna-packaging protein fi | C9309_25915 | Not Available | Negative | 4945825 - 4946220 | 13974.3 |
| major capsid protein | C9309_25920 | Not Available | Negative | 4946262 - 4947175 | 33517.8 |
| duf1076 domain-containing protein | C9309_25925 | Not Available | Negative | 4947176 - 4947609 | 15691.9 |
| duf1076 domain-containing protein | C9309_25930 | Not Available | Negative | 4947900 - 4948235 | 12108.3 |
| phage tail protein | C9309_25935 | Not Available | Negative | 4948590 - 4948714 | 4521.6 |
| hypothetical protein | C9309_25940 | Not Available | Negative | 4948932 - 4949801 | 33031.0 |
| hypothetical protein | C9309_25945 | Not Available | Negative | 4950358 - 4950594 | 8306.38 |
| hypothetical protein | C9309_25950 | Not Available | Negative | 4950594 - 4951028 | 16525.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





